06/04/2026
MaFTools is an essential R package that turns raw somatic variant data into publication-ready visuals. By accepting standard Mutation Annotation Format (MAF) files directly, it eliminates complex custom scripting. In just a few lines of code, you can effortlessly generate iconic Oncoplots, track tumor mutational burden (TMB), and map somatic interactions.
Beyond graphics, maftools features a robust statistical engine for deep exploratory analysis. It empowers researchers to detect mutually exclusive mutations, extract complex mutational signatures, and run survival analyses. Whether you are analyzing custom sequencing panels or massive public datasets like TCGA, it accelerates discovery in cancer genomics. ๐งฌ
๐ Found this helpful? ๐จ Join our ๐๐๐ง๐๐๐ซ ๐๐๐ง๐จ๐ฆ๐ข๐๐ฌ ๐๐จ๐ซ๐ค๐ฌ๐ก๐จ๐ฉ (๐๐ฎ๐ญ๐๐ญ๐ข๐จ๐ง๐๐ฅ ๐๐ง๐๐ฅ๐ฒ๐ฌ๐ข๐ฌ; ๐๐๐ซ๐ข๐๐ง๐ญ ๐๐ง๐ง๐จ๐ญ๐๐ญ๐ข๐จ๐ง, & ๐๐ฅ๐ข๐ง๐ข๐๐๐ฅ ๐๐๐ญ๐ ๐๐ง๐ญ๐๐ซ๐ฉ๐ซ๐๐ญ๐๐ญ๐ข๐จ๐ง)!
๐งฌ๐ฌ This hands-on workshop will take you through the hallmarks of cancer, key pathways, and genomic alterations, diving into driver vs. passenger mutations, SNVs, Indels, CNVs, and SVs. Explore oncogenes, tumor suppressors, and NGS data formats (FASTQ, BAM, VCF) while working with real datasets from COSMIC, TCGA, and cBioPortal.
Learn variant analysis (IGV, ANNOVAR, VEP) & clinical annotation (MAFtools, oncoplots, mutation burden analysis), and apply your skills on real cancer data. ๐
๐ For more information on workshop structure, curriculum, and training resources, register here: https://forms.gle/3GPoVrHxFpGvBt6HA
๐
๐๐๐ญ๐: July 6, 2026 - July 9,2026
๐ ๐๐ข๐ฆ๐: 7:00 PM IST | 8:30 AM CDT
๐ ๐๐จ๐๐๐ญ๐ข๐จ๐ง: Online